NGS Data Analysis Raw Reads → Results, Not Months.
Upload your FASTQ, BAM, or VCF files. Get QC, alignment, quantification, differential expression, variant calling, pathway analysis, and publication-ready figures.
In 3–7 days
Starting
Time
Supported
Review
Every NGS Assay. One Team.
Whatever your sequencer produced — Illumina, BGI, ONT, PacBio — we analyze it.
Bulk RNA-Seq Analysis
$150–300/sampleDifferential gene expression, pathway enrichment (KEGG, GO, Reactome), GSEA, heatmaps, volcano plots, PCA.
WGS / WES Variant Analysis
$200–500/sampleGermline or somatic variant calling, annotation (ClinVar, gnomAD, dbSNP, COSMIC), filtering, ACMG classification.
Single-Cell RNA-Seq
$400–800/sample10x Genomics, Drop-Seq, Smart-Seq2. Cell-type clustering, marker gene identification, trajectory analysis.
Metagenomics (16S / Shotgun)
$150–250/sample16S rRNA amplicon or whole-genome shotgun sequencing. Taxonomic profiling, alpha/beta diversity, differential abundance.
ChIP-Seq / CUT&RUN
$200–400/samplePeak calling, motif analysis, differential binding, annotation of peaks to nearest genes, signal heatmaps, genome browser tracks.
ATAC-Seq
$200–400/sampleOpen chromatin profiling. Peak calling, nucleosome-free region identification, TF footprinting, differential accessibility between conditions, integration with RNA-Seq.
Multi-Omics Integration
Combine RNA-Seq + ATAC-Seq + ChIP-Seq + WGS for a complete picture. We integrate across data modalities with statistical rigor — from joint NMF to MOFA+ to custom correlation frameworks.
Starting at $5,000 per project.
Transparent Per-Sample Pricing
All prices in USD. Volume discounts for 20+ samples. Custom quotes for complex or multi-phase projects.
| Assay Type | Per Sample | 10+ Samples | 50+ Samples | TAT | Input |
|---|---|---|---|---|---|
| Bulk RNA-Seq | $200 | $170 | $150 | 3-5 days | FASTQ (PE/SE) |
| WES (Exome) | $250 | $220 | $200 | 3-5 days | FASTQ / BAM |
| WGS (30x) | $400 | $350 | $300 | 5-7 days | FASTQ / CRAM |
| scRNA-Seq (10x) | $600 | $500 | $400 | 7-10 days | FASTQ / CellRanger |
| 16S Metagenomics | $150 | $130 | $110 | 3-5 days | FASTQ (PE) |
| Shotgun Metagenomics | $250 | $220 | $190 | 5-7 days | FASTQ (PE) |
| ChIP-Seq / CUT&RUN | $300 | $260 | $220 | 5-7 days | FASTQ (PE) |
| ATAC-Seq | $300 | $260 | $220 | 5-7 days | FASTQ (PE) |
What's Included
QC, alignment, primary + secondary analysis, publication-ready figures, methods section, raw analysis files, one round of revision. All tools and compute costs included.
Add-Ons
Rush delivery (48hr): +50%. Additional comparisons: $200 each. Custom visualization: $300–$800. Manuscript figure polishing: $500. GSEA deep-dive: $400.
Volume & Retainer
100+ samples: custom quote. Monthly retainer (10 samples/mo): 25% off list. Annual contracts: 30% off + priority queue. Academic pricing available.
Any Sequencer. Any Format.
We're platform-agnostic. Whether your data comes from Illumina NovaSeq, BGI DNBSEQ, Oxford Nanopore, PacBio, or Ion Torrent — we handle it. Upload via SFTP, S3, Google Drive, or any cloud link.
Input Formats
Output Formats
NovaSeq · HiSeq · MiSeq · NextSeq · iSeq
DNBSEQ-G400 · DNBSEQ-T7 · MGISEQ-2000
MinION · GridION · PromethION
Sequel II/IIe · Revio · Vega
Frequently Asked Questions
What data do I need to send you?
How do I transfer large sequencing files?
Do you work with non-human organisms?
Is my data confidential?
What is multi-omics integration?
Can you help write the methods section for my paper?
Send Us Your Data.
Get Results in Days.
Free consultation. Clear quote within 24 hours. No obligation.
Response Time
Within 24 hours, typically same day
Request NGS Analysis Quote
Need More Than NGS Analysis?
Explore our full bioinformatics service portfolio.
Genix.ai is an AI-powered clinical platform using NGS and imaging to detect biomarkers early, enabling clinicians to deliver cost-effective, personalized treatments for rare pediatric conditions, cancer care, and infectious diseases.
Solutions
Compliance
Connect
©2026 Radiome Health Private Limited.
Developed in Association with Chadura.